Searched refs:activeSegment (Results 1 – 2 of 2) sorted by relevance
168 COVER_segment_t activeSegment; in FASTCOVER_selectSegment() local172 activeSegment.begin = begin; in FASTCOVER_selectSegment()173 activeSegment.end = begin; in FASTCOVER_selectSegment()174 activeSegment.score = 0; in FASTCOVER_selectSegment()179 while (activeSegment.end < end) { in FASTCOVER_selectSegment()188 activeSegment.end += 1; in FASTCOVER_selectSegment()191 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in FASTCOVER_selectSegment()200 activeSegment.begin += 1; in FASTCOVER_selectSegment()205 bestSegment = activeSegment; in FASTCOVER_selectSegment()210 while (activeSegment.begin < end) { in FASTCOVER_selectSegment()[all …]
423 COVER_segment_t activeSegment; in COVER_selectSegment() local427 activeSegment.begin = begin; in COVER_selectSegment()428 activeSegment.end = begin; in COVER_selectSegment()429 activeSegment.score = 0; in COVER_selectSegment()433 while (activeSegment.end < end) { in COVER_selectSegment()443 activeSegment.score += freqs[newDmer]; in COVER_selectSegment()446 activeSegment.end += 1; in COVER_selectSegment()450 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in COVER_selectSegment()453 activeSegment.begin += 1; in COVER_selectSegment()458 activeSegment.score -= freqs[delDmer]; in COVER_selectSegment()[all …]