Searched refs:activeSegment (Results 1 – 2 of 2) sorted by relevance
160 COVER_segment_t activeSegment; in FASTCOVER_selectSegment() local164 activeSegment.begin = begin; in FASTCOVER_selectSegment()165 activeSegment.end = begin; in FASTCOVER_selectSegment()166 activeSegment.score = 0; in FASTCOVER_selectSegment()171 while (activeSegment.end < end) { in FASTCOVER_selectSegment()180 activeSegment.end += 1; in FASTCOVER_selectSegment()183 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in FASTCOVER_selectSegment()192 activeSegment.begin += 1; in FASTCOVER_selectSegment()197 bestSegment = activeSegment; in FASTCOVER_selectSegment()202 while (activeSegment.begin < end) { in FASTCOVER_selectSegment()[all …]
415 COVER_segment_t activeSegment; in COVER_selectSegment() local419 activeSegment.begin = begin; in COVER_selectSegment()420 activeSegment.end = begin; in COVER_selectSegment()421 activeSegment.score = 0; in COVER_selectSegment()425 while (activeSegment.end < end) { in COVER_selectSegment()435 activeSegment.score += freqs[newDmer]; in COVER_selectSegment()438 activeSegment.end += 1; in COVER_selectSegment()442 if (activeSegment.end - activeSegment.begin == dmersInK + 1) { in COVER_selectSegment()445 activeSegment.begin += 1; in COVER_selectSegment()450 activeSegment.score -= freqs[delDmer]; in COVER_selectSegment()[all …]